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Identification and characterisation of oil sludge degrading bacteria isolated from compost

机译:从堆肥中分离的油泥降解菌的鉴定和表征

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摘要

Compounds present in oil sludge such as polycyclic aromatic hydrocarbons (PAHs) are known to becytotoxic, mutagenic and potentially carcinogenic. Microorganisms including bacteria and fungi have been reportedto degrade oil sludge components to innocuous compounds such as carbon dioxide, water and salts. In the presentstudy, we isolated different bacteria with PAH-degrading capabilities from compost prepared from oil sludge andanimal manures. These bacteria were isolated on a mineral base medium and mineral salt agar plates. A total of 31morphologically distinct isolates were carefully selected from 5 different compost treatments for identifi cation usingpolymerase chain reaction (PCR) of the 16S rRNA gene with specifi c primers (universal forward 16S-P1 PCR andreverse 16S-P2 PCR). The amplicons were sequenced and sequences were compared with the known nucleotides fromthe GenBank. The phylogenetic analyses of the isolates showed that they belong to 3 different clades; Firmicutes,Proteobacteria and Actinobacteria. These bacteria identifi ed were closely related to the genera Bacillus, Arthrobacter,Staphylococcus, Brevibacterium, Variovorax, Paenibacillus, Ralstonia and Geobacillus. The results showed thatBacillus species were predominant in all composts. Based on the results of the degradation of the PAHs in thecomposts and results of previous studies on bacterial degradation of hydrocarbons in oil, the characteristics of thesebacterial isolates suggests that they may be responsible for the breakdown of PAHs of different molecular weights inthe composts. Thus, they may be potentially useful for bioremediation of oil sludge during compost bioremediation.
机译:已知存在于油泥中的化合物,例如多环芳烃(PAH),具有细胞毒性,致突变性和潜在致癌性。据报道,包括细菌和真菌在内的微生物会将油泥成分降解为无害化合物,例如二氧化碳,水和盐。在本研究中,我们从油泥和动物粪便制备的堆肥中分离了具有PAH降解能力的不同细菌。这些细菌在矿物基础培养基和矿物盐琼脂平板上分离。使用16S rRNA基因与特定引物的聚合酶链反应(PCR)从5种不同的堆肥处理中仔细选择了总共31种形态学上不同的分离物进行鉴定(通用正向16S-P1 PCR和反向16S-P2 PCR)。对扩增子进行测序,并将序列与来自GenBank的已知核苷酸进行比较。分离株的系统发育分析表明它们属于3个进化枝。 Firmicutes,Proteobacteria和放线菌。鉴定出的这些细菌与芽孢杆菌属,节杆菌属,葡萄球菌属,短杆菌属,Variovorax,Paenibacillus,Ralstonia和Geobacillus密切相关。结果表明,芽孢杆菌属菌种在所有堆肥中占主导地位。根据堆肥中PAHs的降解结果和先前对油中碳氢化合物的细菌降解研究的结果,这些细菌分离株的特征表明,它们可能是导致堆肥中不同分子量PAHs分解的原因。因此,它们可能在堆肥生物修复过程中对油泥的生物修复有用。

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